Information for 11-AGTAATYACTMT (Motif 9)

C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
Reverse Opposite:
T C G A C A T G C T G A T A C G G C A T T C A G C G T A G C A T G A C T C T G A G A T C G A C T
p-value:1e-175
log p-value:-4.046e+02
Information Content per bp:1.501
Number of Target Sequences with motif143.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets104.0 +/- 42.6bp
Average Position of motif in Background134.5 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0072.1_Hoxc8/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AGTAATYACTMT
TTGGGGTAATTAACGT
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

PH0071.1_Hoxc6/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGTAATYACTMT-
NNTNATTAATTAATTTG
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T A C G T
G C A T A C G T A G C T G C A T T G C A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A G C T C G A T G A C T T C A G

PH0062.1_Hoxb7/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGTAATYACTMT
TNNCATTAATTANTNC
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0053.1_Hoxa6/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGTAATYACTMT
NTNAGGTAATTACCTT
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

PH0007.1_Barx1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGTAATYACTMT
ATNNACTAATTACTTT
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T

PH0052.1_Hoxa5/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGTAATYACTMT
NTGAGCTAATTACCNT
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T

PH0081.1_Pdx1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGTAATYACTMT
NTGNGCTAATTACCNN
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T

POU6F1/MA0628.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGTAATYACTMT
ATTAATTAAT--
 C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGTAATYACTMT
GNTAATTAGN--
 C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGTAATYACTMT-
GAAAATTAATTACTTCG
 A C G T A C G T A C G T A C G T C T G A C T A G G A C T C T G A C G T A G C A T A G T C C G T A A T G C G A C T G T A C A G C T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G