Information for 22-AACATTCAAATT (Motif 22)

T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A G C T A C T G G T C A C G T A A C G T C T A G A C G T A C G T
p-value:1e-100
log p-value:-2.322e+02
Information Content per bp:1.977
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.9 +/- 72.2bp
Average Position of motif in Background194.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AACATTCAAATT
--NATTCAAAT-
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AACATTCAAATT--
-ATATGCAAATNNN
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AACATTCAAATT
-ATATGCAAAT-
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AACATTCAAATT
AATATGCAAATT
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

Sox11/MA0869.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACATTCAAATT---
AACACTGAAATTGTT
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AACATTCAAATT--
AATATGCAAATTAG
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AACATTCAAATT
-TTATGCAAAT-
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACATTCAAATT-
ATTATGCTAATTT
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AACATTCAAATT---
TTGTATGCAAATTAGA
 A C G T T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AACATTCAAATT
CGGTTTCAAA--
 T G C A C G T A A G T C C G T A A C G T A C G T A G T C C T G A C G T A T C G A A C G T A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T