Information for 18-AAGTCCAGGTAC (Motif 18)

C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C
Reverse Opposite:
A C T G A C G T C G T A A T G C G A T C C G A T A T C G C T A G C G T A A G T C A C G T A C G T
p-value:1e-119
log p-value:-2.742e+02
Information Content per bp:1.969
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.8 +/- 36.1bp
Average Position of motif in Background74.1 +/- 74.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAGTCCAGGTAC
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AAGTCCAGGTAC--
----VCAGGTRDRY
 C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGTCCAGGTAC-------
--TTCNAAGTACTTNNNNN
 C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAGTCCAGGTAC---
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C A C G T A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAGTCCAGGTAC-
---NNCAGGTGCG
 C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C A C G T
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGTCCAGGTAC
AAAAGTCAA-----
 A C G T A C G T C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAGTCCAGGTAC--
----CCAGGAACAG
 C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGTCCAGGTAC----
AAAATACATGTAAAAAT
 A C G T C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGTCCAGGTAC-
---NNCAGGTGNN
 C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AAGTCCAGGTAC
GGGGTCAAAGTCCAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C T A G A C G T A G T C A T G C C G T A C A T G A T C G A C G T C G T A G T A C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T