Information for 12-CCATACAAAGGA (Motif 10)

T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C G A C T A G C T C G A T C T A G C G A T G C T A C G A T C A T G A T C G
p-value:1e-166
log p-value:-3.836e+02
Information Content per bp:1.731
Number of Target Sequences with motif170.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif30.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets100.1 +/- 47.7bp
Average Position of motif in Background81.5 +/- 46.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCATACAAAGGA--
AAACAGACAAAGGAAT
 A C G T A C G T T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCATACAAAGGA
---AACAAAGG-
 T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCATACAAAGGA
-AAAACAAAGG-
 T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCATACAAAGGA
---RACAAWGG-
 T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCATACAAAGGA----
----ACAAAGGNBCCT
 T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCATACAAAGGA
-VRRACAAWGG-
 T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCATACAAAGGA
ATTTGCATACAATGG-
 A C G T A C G T A C G T A C G T T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCATACAAAGGA
----ACAAAG--
 T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCATACAAAGGA---
ATAAGAACAAAGGACTA
 A C G T A C G T T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0078.1_Srf_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCATACAAAGGA
TTCCATATATGGAA
 A C G T A C G T T A G C G T A C G C T A C G A T G C T A A G T C C G T A T C G A C T G A C T A G A C T G G T C A
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A