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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| abc/ | 2024-02-26 05:46 | - | |
| add_peak_tss_distances.py | 2023-08-16 04:03 | 542 | |
| annotate_hit_occurences.py | 2024-01-18 05:29 | 1.8K | |
| annotate_seqlet_occurences.py | 2023-07-30 16:54 | 713 | |
| archr_extract_qc.R | 2023-04-24 03:15 | 943 | |
| archr_write_qc.R | 2023-03-14 04:28 | 1.2K | |
| build_atac_observed_wl.py | 2023-05-18 20:02 | 579 | |
| build_folds.py | 2023-05-18 18:42 | 2.5K | |
| build_pseudoreplicates.py | 2023-05-04 16:25 | 1.1K | |
| build_track_datahub.py | 2024-03-21 19:27 | 3.2K | |
| calc_effective_sizes.py | 2023-05-03 21:02 | 1.4K | |
| chrombpnet_concat_embeddings.py | 2024-04-22 04:46 | 339 | |
| chrombpnet_extract_embeddings.py | 2024-04-21 22:52 | 1.9K | |
| clip_peaks.py | 2023-05-09 03:22 | 786 | |
| collate_contribs.py | 2023-07-24 15:30 | 2.6K | |
| collate_peak_outputs.py | 2023-07-19 21:55 | 7.8K | |
| contrib_gkm_embed.py | 2024-04-25 07:21 | 1.1K | |
| downsample_fragments.py | 2023-08-05 03:15 | 1.0K | |
| exon_conservation.py | 2024-05-05 04:52 | 1.5K | |
| extract_profiles_from_bw.py | 2024-05-04 03:22 | 2.3K | |
| filter_chromsizes.py | 2023-05-09 02:47 | 954 | |
| filter_mito.py | 2023-05-04 00:18 | 807 | |
| filter_orthologs.py | 2023-04-25 20:01 | 1.2K | |
| filter_orthologs_human.py | 2023-04-26 00:32 | 1.2K | |
| great/ | 2024-05-08 09:29 | - | |
| merge_conservation_scores.py | 2024-05-05 06:21 | 512 | |
| merge_peak_scores.py | 2023-07-17 21:51 | 739 | |
| merge_tss_dists.py | 2024-05-02 22:56 | 530 | |
| modisco_seqlet_occurences.py | 2023-07-31 21:08 | 2.4K | |
| motif_gene_linking.py | 2024-01-18 22:26 | 2.7K | |
| partition_barcodes.py | 2023-05-04 02:50 | 1.3K | |
| peak_conservation.py | 2024-05-05 04:52 | 1.6K | |
| peak_tss_distance.py | 2024-05-05 01:10 | 5.3K | |
| peak_tss_distance_2.py | 2024-06-19 16:26 | 5.7K | |
| promoter_peaks.py | 2024-05-05 08:32 | 946 | |
| scarlink/ | 2023-11-15 03:28 | - | |
| score_peaks_contribs.py | 2023-07-19 21:55 | 11K | |
| score_peaks_predict.py | 2023-07-17 05:00 | 11K | |
| seurat_build.R | 2023-03-14 04:28 | 3.0K | |
| seurat_build_reference_human.R | 2023-04-26 16:48 | 2.7K | |
| seurat_cc_score.R | 2023-04-29 20:20 | 2.0K | |
| seurat_cluster.R | 2023-04-30 19:54 | 1.3K | |
| seurat_countsplit.R | 2023-03-14 04:28 | 1.8K | |
| seurat_doublets_rna.R | 2023-03-14 04:28 | 3.3K | |
| seurat_install_doubletfinder.R | 2023-03-14 04:28 | 482 | |
| seurat_map_orthologs.R | 2023-04-25 23:24 | 1.9K | |
| seurat_merge.R | 2023-04-27 19:56 | 5.4K | |
| seurat_name_l1.R | 2023-05-01 22:22 | 1.7K | |
| seurat_plot_genes.R | 2023-04-28 03:34 | 2.0K | |
| seurat_plot_qc.R | 2023-04-25 21:52 | 5.4K | |
| seurat_transfer_human.R | 2023-04-26 04:29 | 2.6K | |
| seurat_write_metadata.R | 2023-05-02 03:17 | 535 | |
| split_fragments.py | 2023-05-03 21:26 | 1.2K | |
| write_amulet_barcodes.py | 2023-03-14 04:28 | 1.5K | |
| write_atac_qc.py | 2023-04-24 17:34 | 5.5K | |