Azimuth: A Shiny App Demonstrating a Query-Reference Mapping Algorithm for Single-Cell Data
Create a Seurat object compatible with Azimuth.
Returns a dataframe of the frequency or percentage of levels of category.2 (column) for object split by each level of category.1 (row)
Converts gene names of query to match type/species of reference names (human or mouse).
Sanitize feature names for 'selectInput'
Return names of metadata columns in a Seurat object that have an appropriate number of levels for plotting when converted to a factor
Prepare differential expression results for rendering