Package: Azimuth
Type: Package
Title: A Shiny App Demonstrating a Query-Reference Mapping Algorithm
        for Single-Cell Data
Version: 0.4.6
Date: 2022-08-23
Authors@R: c(
  person(given = 'Andrew', family = 'Butler', email = 'abutler@nygenome.org', role = 'aut', comment = c(ORCID = '0000-0003-3608-0463')),
  person(given = "Charlotte", family = "Darby", email = "cdarby@nygenome.org", role = "aut", comment = c(ORCID = "0000-0003-2195-5300")),
  person(given = "Yuhan", family = "Hao", email = "yhao@nygenome.org", role = "aut", comment = c(ORCID = "0000-0002-1810-0822")),
  person(given = "Paul", family = "Hoffman", email = "phoffman@nygenome.org", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7693-8957")),
  person(given = "Jaison", family = "Jain", email = "jjain@nygenome.org", role = "ctb", comment = c(ORCID = "0000-0002-9478-5018")),
  person(given = "Rahul", family = "Satija", email = "rsatija@nygenome.org", role = "aut", comment = c(ORCID = "0000-0001-9448-8833")),
  person("Satija Lab and Collaborators", role = "fnd")
  )
Description: What the package does (one paragraph).
URL: https://github.com/satijalab/azimuth
BugReports: https://github.com/satijalab/azimuth/issues
License: GPL-3 | file LICENSE
Encoding: UTF-8
RoxygenNote: 7.1.2
biocViews:
Remotes: immunogenomics/presto, mojaveazure/seurat-disk,
        satijalab/seurat-data
Depends: R (>= 4.0.0)
Imports: DT (>= 0.15), future (>= 1.19.1), ggplot2 (>= 3.3.2),
        glmGamPoi (>= 1.0.0), googlesheets4 (>= 0.2.0), hdf5r (>=
        1.3.2), htmltools (>= 0.5.0), httr (>= 1.4.2), jsonlite (>=
        1.7.0), Matrix (>= 1.2.18), methods, patchwork (>= 1.0.1),
        presto, Rcpp (>= 1.0.7), rlang (>= 0.4.8), scales (>= 1.1.1),
        Seurat (>= 4.0.0), SeuratDisk, SeuratObject, SeuratData, shiny
        (>= 1.5.0), shinyBS (>= 0.61), shinydashboard (>= 0.7.1),
        shinyjs (>= 2.0.0), stats, stringr (>= 1.4.0), tools, utils,
        plotly, withr (>= 2.3.0)
LinkingTo: Rcpp(>= 0.11.0)
Collate: 'RcppExports.R' 'zzz.R' 'ui.R' 'helpers.R' 'azimuth.R'
        'generics.R' 'server.R'
RemoteType: github
RemoteHost: api.github.com
RemoteRepo: azimuth
RemoteUsername: satijalab
RemoteRef: HEAD
RemoteSha: f3c79048e27854338f2cc2fa8ccfe7403fe6cfe6
GithubRepo: azimuth
GithubUsername: satijalab
GithubRef: HEAD
GithubSHA1: f3c79048e27854338f2cc2fa8ccfe7403fe6cfe6
NeedsCompilation: yes
Packaged: 2022-09-20 13:59:44 UTC; atwang
Author: Andrew Butler [aut] (<https://orcid.org/0000-0003-3608-0463>),
  Charlotte Darby [aut] (<https://orcid.org/0000-0003-2195-5300>),
  Yuhan Hao [aut] (<https://orcid.org/0000-0002-1810-0822>),
  Paul Hoffman [aut, cre] (<https://orcid.org/0000-0002-7693-8957>),
  Jaison Jain [ctb] (<https://orcid.org/0000-0002-9478-5018>),
  Rahul Satija [aut] (<https://orcid.org/0000-0001-9448-8833>),
  Satija Lab and Collaborators [fnd]
Maintainer: Paul Hoffman <phoffman@nygenome.org>
Built: R 4.1.3; x86_64-conda-linux-gnu; 2022-09-20 13:59:45 UTC; unix