Information for 11-TAGGGCGC (Motif 9)


Reverse Opposite:

p-value:1e-30
log p-value:-6.981e+01
Information Content per bp:1.405
Number of Target Sequences with motif881.0
Percentage of Target Sequences with motif23.39%
Number of Background Sequences with motif3267.6
Percentage of Background Sequences with motif16.11%
Average Position of motif in Targets434.1 +/- 362.7bp
Average Position of motif in Background292.5 +/- 218.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAGGGCGC
TAGCGCGC

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGC-----
ATAAGGGCGCGCGAT

TRB2/MA1073.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCGC
TTAGGGCA-

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGC-----
ATAAAGGCGCGCGAT

TBF1/MA0403.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCGC
NTAGGGTT-

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TAGGGCGC---
---GGCGCGCT

STP2/MA0395.1/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TAGGGCGC------
NNGNNGTGCGGCGCCGNTNN

brk/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TAGGGCGC-
--CGGCGCC

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAGGGCGC------
NNNTNGGGCGTATNNTN

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TAGGGCGC----
NNNNTTGGGCACNNCN