Information for 7-CACTGTGC (Motif 6)


Reverse Opposite:

p-value:1e-36
log p-value:-8.363e+01
Information Content per bp:1.797
Number of Target Sequences with motif488.0
Percentage of Target Sequences with motif12.95%
Number of Background Sequences with motif1438.1
Percentage of Background Sequences with motif7.09%
Average Position of motif in Targets438.9 +/- 350.9bp
Average Position of motif in Background286.0 +/- 213.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CACTGTGC
-GCTGTG-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CACTGTGC----
--CTGTTCCTGG

MET28/MA0332.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CACTGTGC
--CTGTGG

MET28(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CACTGTGC
--CTGTGG

HMRA1/MA0327.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACTGTGC
-ATTGTGC

MATA1(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACTGTGC
-ATTGTGC

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CACTGTGC----
--CGGTGCTTCC

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTGC---
NNGCNCTGCGCGGC

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACTGTGC
CTTTGT--

SUT1?/SacCer-Promoters/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACTGTGC
CCCCGCGC