Information for 2-CGCGCGGC (Motif 2)


Reverse Opposite:

p-value:1e-109
log p-value:-2.519e+02
Information Content per bp:1.594
Number of Target Sequences with motif1742.0
Percentage of Target Sequences with motif46.24%
Number of Background Sequences with motif5891.1
Percentage of Background Sequences with motif29.04%
Average Position of motif in Targets451.1 +/- 342.2bp
Average Position of motif in Background285.5 +/- 255.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC30/MA0375.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CGCGCGGC
CGCGCGCG

RSC3/MA0374.1/Jaspar

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGCGG-

SUT1(MacIsaac)/Yeast

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGC
TAGCGCGC---

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGTGCC

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------CGCGCGGC-
NCANGCGCGCGCGCCA

MBP1/MA0329.1/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC
NNCGCGT---

SUT1?/SacCer-Promoters/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGCGCGGC-
-GCGCGGGG

STP1(MacIsaac)/Yeast

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CGCGCGGC--
--TGCGGCGC