Information for 16-GAGATGAG (Motif 13)


Reverse Opposite:

p-value:1e-20
log p-value:-4.617e+01
Information Content per bp:1.931
Number of Target Sequences with motif352.0
Percentage of Target Sequences with motif9.34%
Number of Background Sequences with motif1127.9
Percentage of Background Sequences with motif5.56%
Average Position of motif in Targets420.1 +/- 389.7bp
Average Position of motif in Background282.2 +/- 206.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GAGATGAG--
GCGATGAGMT

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----GAGATGAG--------
NNANNGCGATGAGCTNNNNNN

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----GAGATGAG--------
ANGANGCGATGAGGTGCNNNN

CHA4(MacIsaac)/Yeast

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GAGATGAG
TGCGATGAG

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAGATGAG
-AGATAAG

GAT1(MacIsaac)/Yeast

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAGATGAG
-AGATAAG

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAGATGAG-
NNGAGATAAGA

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAGATGAG--
CGCGCTGAGCN

CDC5/MA0579.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAGATGAG--
CGCGCTGAGCN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGATGAG--
NAGATAAGNN