Information for 13-ARCGCGCA (Motif 11)


Reverse Opposite:

p-value:1e-29
log p-value:-6.718e+01
Information Content per bp:1.733
Number of Target Sequences with motif477.0
Percentage of Target Sequences with motif12.66%
Number of Background Sequences with motif1499.2
Percentage of Background Sequences with motif7.39%
Average Position of motif in Targets385.8 +/- 310.6bp
Average Position of motif in Background277.3 +/- 210.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ARCGCGCA
TAGCGCGC-

hkb/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ARCGCGCA
CAACGCCCA

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ARCGCGCA-
AAACGCGAAA

MBP1/MA0329.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ARCGCGCA
-ACGCGTA

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ARCGCGCA
AACGCGT-

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ARCGCGCA-
-ACGCGAAA

RSC3/MA0374.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ARCGCGCA-
--CGCGCGG

DAL82/MA0291.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ARCGCGCA----
---GCGCACATT

SWI4/MA0401.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ARCGCGCA-
-ACGCGAAA

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ARCGCGCA------
GCCGCGCAGTGCGT