Information for 12-CCGGCTAG (Motif 10)


Reverse Opposite:

p-value:1e-29
log p-value:-6.825e+01
Information Content per bp:1.805
Number of Target Sequences with motif347.0
Percentage of Target Sequences with motif9.21%
Number of Background Sequences with motif967.1
Percentage of Background Sequences with motif4.77%
Average Position of motif in Targets443.0 +/- 303.6bp
Average Position of motif in Background282.9 +/- 243.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1(MacIsaac)/Yeast

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGGCTAG
CCGCCGAG

ERF6/MA1006.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCGGCTAG
CTGCCGGCGT-

IME1/MA0320.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGGCTAG
CCGCCGAG

ERF105/MA1000.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCGGCTAG
TGCCGGCG--

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTAG
TCGGCGGCTA-

CAT8/MA0280.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCTAG
NTCCGG----

ERF039/MA0995.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTAG
NNACCGACAN-

ERF069/MA0997.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCTAG
NGGCGGCGN-

YDR026C(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGGCTAG
CCGGGT--

UME6(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTAG
TCGGCGGCTA-