Information for 9-CCCATACA (Motif 8)


Reverse Opposite:

p-value:1e-38
log p-value:-8.845e+01
Information Content per bp:1.965
Number of Target Sequences with motif438.0
Percentage of Target Sequences with motif10.47%
Number of Background Sequences with motif1110.1
Percentage of Background Sequences with motif5.36%
Average Position of motif in Targets444.4 +/- 326.6bp
Average Position of motif in Background285.4 +/- 199.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP1/MA0359.1/Jaspar

Match Rank:1
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CCCATACA
CACCCATACA

SFP1(MacIsaac)/Yeast

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ACCCGTACAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CCCATACA-
ACCCGTACAT

RAP1(MacIsaac)/Yeast

Match Rank:4
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CCCATACA-
ACACCCATACAC

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:5
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA
CACCCGTACA

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA-
CACCCGTACAT

sma-4/MA0925.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA--
NNCCAGACANN

FHL1(MacIsaac)/Yeast

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ATCCGTACAT

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCCATACA-----
CAAATCCAGACATCACA

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCCATACA-
-CCAGACAG