Information for 23-TGTGCCWC (Motif 18)


Reverse Opposite:

p-value:1e-20
log p-value:-4.784e+01
Information Content per bp:1.801
Number of Target Sequences with motif1065.0
Percentage of Target Sequences with motif25.46%
Number of Background Sequences with motif4027.2
Percentage of Background Sequences with motif19.46%
Average Position of motif in Targets429.5 +/- 353.7bp
Average Position of motif in Background283.9 +/- 203.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PHD1(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TGTGCCWC
-GTGCCT-

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCCWC-
NNNNTTGTGTGCTTNN

CUP9/MA0288.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCCWC
AATGTGTCA-

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGTGCCWC-
TTTGCCACC

RPN4(MacIsaac)/Yeast

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCCWC--
TTTTGCCACCG

RPN4/MA0373.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTGCCWC-
--CGCCACC

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCCWC-
NNGCGTGTGTGCNGCN

MET31/MA0333.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTGCCWC---
--CGCCACANN

CRZ1/MA0285.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTGCCWC
CTAAGCCAC

E(spl)/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTGCCWC----
TGTGCCACGTGC