Information for 22-CACTAAAC (Motif 17)


Reverse Opposite:

p-value:1e-21
log p-value:-4.907e+01
Information Content per bp:1.883
Number of Target Sequences with motif458.0
Percentage of Target Sequences with motif10.95%
Number of Background Sequences with motif1426.9
Percentage of Background Sequences with motif6.90%
Average Position of motif in Targets402.1 +/- 323.3bp
Average Position of motif in Background292.2 +/- 193.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACTAAAC
NSCACTYVAV

TBF1/MA0403.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACTAAAC
AACCCTAA--

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CACTAAAC
AASCACTCAA-

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CACTAAAC----
-AATAAACAATN

Unknown2/Drosophila-Promoters/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CACTAAAC
CATCMCTA---

TRB2/MA1073.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACTAAAC
TGCCCTAA--

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACTAAAC---
-GCTAAACGGT

tin/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACTAAAC
CACTTAA-

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACTAAAC
RSCACTYRAG

RPH1/MA0372.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACTAAAC
ACCCCTAA--