Information for 17-CGCGTTTT (Motif 14)


Reverse Opposite:

p-value:1e-27
log p-value:-6.361e+01
Information Content per bp:1.709
Number of Target Sequences with motif944.0
Percentage of Target Sequences with motif22.57%
Number of Background Sequences with motif3316.9
Percentage of Background Sequences with motif16.03%
Average Position of motif in Targets437.4 +/- 361.8bp
Average Position of motif in Background276.7 +/- 199.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DAL82/MA0291.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTTTT
GCGCACATT

CST6(MacIsaac)/Yeast

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGCGTTTT
TGCATTTN

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CGCGTTTT
ACGCGTT--

MBP1/MA0329.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTTTT
NNCGCGT---

CMTA3/MA0970.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGCGTTTT
CCGCGTTAC

CMTA2/MA0969.1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CGCGTTTT
AAACCGCGT---

DAL82(MacIsaac)/Yeast

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTTTT-
GCGCAANTTT

SWI6(MacIsaac)/Yeast

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCGTTTT
CGCGTC--

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTTTT
GCGCGCTA-

CDF2/MA0973.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTTTT-
NNACTTTTTN