Information for 15-GGGTTCGA (Motif 12)


Reverse Opposite:

p-value:1e-29
log p-value:-6.781e+01
Information Content per bp:1.805
Number of Target Sequences with motif395.0
Percentage of Target Sequences with motif9.44%
Number of Background Sequences with motif1062.4
Percentage of Background Sequences with motif5.13%
Average Position of motif in Targets369.3 +/- 303.0bp
Average Position of motif in Background276.1 +/- 201.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGGTTCGA
-GATTCGA

XBP1/MA0414.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGGTTCGA-
--NCTCGAG

OPI1(MacIsaac)/Yeast

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

YER051W(MacIsaac)/Yeast

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GGGTTCGA-
---TTCGAA

OPI1/MA0349.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

SMZ/MA0553.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGGTTCGA--
--GTACGAGG

lin-14/MA0261.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

SNF1(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTCGA-------
CCGGGTTCGATCCCCGG

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGTTCGA--
GAGSCCGAGC