Information for 11-CGCAYCGC (Motif 10)


Reverse Opposite:

p-value:1e-36
log p-value:-8.407e+01
Information Content per bp:1.689
Number of Target Sequences with motif695.0
Percentage of Target Sequences with motif16.61%
Number of Background Sequences with motif2109.9
Percentage of Background Sequences with motif10.20%
Average Position of motif in Targets447.7 +/- 393.8bp
Average Position of motif in Background285.4 +/- 210.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CGCAYCGC
AKCTCATCGC

CHA4(MacIsaac)/Yeast

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CGCAYCGC-
CTCATCGCA

TOD6/MA0350.1/Jaspar

Match Rank:3
Score:0.78
Offset:-8
Orientation:forward strand
Alignment:--------CGCAYCGC-----
AGGCACAGCTCATCGCGTTTT

DOT6/MA0351.1/Jaspar

Match Rank:4
Score:0.77
Offset:-8
Orientation:forward strand
Alignment:--------CGCAYCGC-----
TTCTGCACCTCATCGCATCCT

Run/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CGCAYCGC-
--CACCGCC

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGCAYCGC---
CGCACCGCACG

pros/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGCAYCGC-
--CATGNCT

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGCAYCGC-
GGCTCAGCGCG

CDC5/MA0579.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGCAYCGC-
GGCTCAGCGCG

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGCAYCGC----
--CACCGCCCCC