Information for 8-ATGCACGG (Motif 7)


Reverse Opposite:

p-value:1e-33
log p-value:-7.756e+01
Information Content per bp:1.913
Number of Target Sequences with motif335.0
Percentage of Target Sequences with motif8.12%
Number of Background Sequences with motif821.6
Percentage of Background Sequences with motif3.92%
Average Position of motif in Targets401.4 +/- 284.3bp
Average Position of motif in Background277.3 +/- 201.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ATGCACGG--
ATGTACGGAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ATGCACGG--
ATGTACGGGT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATGCACGG---
ATGTACGGGTG

SFP1(MacIsaac)/Yeast

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATGCACGG--
ATGTACGGGT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ATGCACGG------
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ATGCACGG------
CCCTNCTGTACGGACGNNA

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATGCACGG---
-TGTACGGGTG

SPL12/MA1057.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATGCACGG-
-TGTACGGT

PHD1/MA0355.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATGCACGG
NGNTGCAGGN

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATGCACGG
-GGTACGG