Information for 7-GGGTTCGA (Motif 6)


Reverse Opposite:

p-value:1e-34
log p-value:-7.896e+01
Information Content per bp:1.831
Number of Target Sequences with motif365.0
Percentage of Target Sequences with motif8.84%
Number of Background Sequences with motif921.1
Percentage of Background Sequences with motif4.40%
Average Position of motif in Targets355.8 +/- 306.0bp
Average Position of motif in Background290.7 +/- 199.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:GGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

XBP1/MA0414.1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGGTTCGA-
--NCTCGAG

YER051W(MacIsaac)/Yeast

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GGGTTCGA-
---TTCGAA

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

SNF1(MacIsaac)/Yeast

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTCGA-------
CCGGGTTCGATCCCCGG

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTCGA----
TNTGGTTTCGATACN

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGTTCGA
TCGGNNCGA