Information for 12-CCGGCTAG (Motif 10)


Reverse Opposite:

p-value:1e-30
log p-value:-7.044e+01
Information Content per bp:1.800
Number of Target Sequences with motif521.0
Percentage of Target Sequences with motif12.62%
Number of Background Sequences with motif1560.7
Percentage of Background Sequences with motif7.45%
Average Position of motif in Targets481.5 +/- 326.2bp
Average Position of motif in Background282.2 +/- 208.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1(MacIsaac)/Yeast

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCGGCTAG
CCGCCGAG

IME1/MA0320.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGGCTAG
CCGCCGAG

ERF6/MA1006.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCGGCTAG
CTGCCGGCGT-

ERF105/MA1000.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCGGCTAG
TGCCGGCG--

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTAG
TCGGCGGCTA-

CAT8/MA0280.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCTAG
NTCCGG----

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGGCTAG---
-CGTCTAGACA

YDR026c/YDR026c_YPD/[](Harbison)/Yeast

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCTAG-
GCCGGGTAAA

YDR026C(MacIsaac)/Yeast

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCGGCTAG
CCGGGT--

ERF069/MA0997.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCTAG
NGGCGGCGN-