Information for 13-CGGTTCGA (Motif 8)


Reverse Opposite:

p-value:1e-24
log p-value:-5.646e+01
Information Content per bp:1.928
Number of Target Sequences with motif275.0
Percentage of Target Sequences with motif6.16%
Number of Background Sequences with motif622.9
Percentage of Background Sequences with motif3.13%
Average Position of motif in Targets346.3 +/- 269.6bp
Average Position of motif in Background306.9 +/- 204.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGA
CGGTTCG-

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CGGTTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CGGTTCGA
TCGGNNCGA

XBP1/MA0414.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CGGTTCGA-
--NCTCGAG

YER051W(MacIsaac)/Yeast

Match Rank:7
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CGGTTCGA-
---TTCGAA

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTCGA-
CCGGTTTART

lin-14/MA0261.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGA
GTGTTC--