Information for 11-CCCCYTWC (Motif 7)


Reverse Opposite:

p-value:1e-30
log p-value:-7.072e+01
Information Content per bp:1.775
Number of Target Sequences with motif554.0
Percentage of Target Sequences with motif12.41%
Number of Background Sequences with motif1483.6
Percentage of Background Sequences with motif7.45%
Average Position of motif in Targets482.8 +/- 426.3bp
Average Position of motif in Background292.4 +/- 216.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN4(MacIsaac)/Yeast

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CCCCYTWC
CCCCCTT-

GIS1/MA0306.1/Jaspar

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CCCCYTWC-
ACCCCTAAA

MSN2/MA0341.1/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CCCCYTWC
CCCCT---

RPH1/MA0372.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CCCCYTWC
ACCCCTAA

MSN4/MA0342.1/Jaspar

Match Rank:5
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:CCCCYTWC
-CCCCT--

YER130C/MA0423.1/Jaspar

Match Rank:6
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CCCCYTWC
ACCCCTATT

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CCCCYTWC
TTCCCCCTAC

RGM1/MA0366.1/Jaspar

Match Rank:8
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:CCCCYTWC
-CCCCT--

MSN4/Literature(Harbison)/Yeast

Match Rank:9
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CCCCYTWC
NCCCCTG-

MSN2(MacIsaac)/Yeast

Match Rank:10
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCCCYTWC
GCCCCTT-