Information for 3-CGCGCGGC (Motif 3)


Reverse Opposite:

p-value:1e-97
log p-value:-2.250e+02
Information Content per bp:1.523
Number of Target Sequences with motif1476.0
Percentage of Target Sequences with motif33.06%
Number of Background Sequences with motif3920.4
Percentage of Background Sequences with motif19.68%
Average Position of motif in Targets461.3 +/- 350.2bp
Average Position of motif in Background290.4 +/- 255.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGCGG-

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
CGCGCGCG--

MBP1/MA0329.1/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC
NNCGCGT---

Tcfl5/MA0632.1/Jaspar

Match Rank:4
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGTGCC

SUT1/MA0399.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

SUT1(MacIsaac)/Yeast

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGC
TAGCGCGC---

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGCGTC

CMTA2/MA0969.1/Jaspar

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CGCGCGGC
ACGCGGNNN

CMTA3/MA0970.1/Jaspar

Match Rank:10
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCGGC
NNNACGCGG---