Information for 25-TTACGTAA (Motif 17)


Reverse Opposite:

p-value:1e-6
log p-value:-1.529e+01
Information Content per bp:1.828
Number of Target Sequences with motif949.0
Percentage of Target Sequences with motif21.26%
Number of Background Sequences with motif3641.4
Percentage of Background Sequences with motif18.28%
Average Position of motif in Targets376.9 +/- 304.9bp
Average Position of motif in Background308.4 +/- 203.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CIN5/CIN5_H2O2Lo/[](Harbison)/Yeast

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:TTACGTAA
TTACGTAA

gt/MA0447.1/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-TTACGTAA-
ATTACGTAAT

YAP6(MacIsaac)/Yeast

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TTACGTAA
TTATGTAA

DBP/MA0639.1/Jaspar

Match Rank:4
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TTACGTAA--
NGTTACGTAATN

GMEB2/MA0862.1/Jaspar

Match Rank:5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TTACGTAA
TTACGTAA

TEF/MA0843.1/Jaspar

Match Rank:6
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TTACGTAA--
NGTTACGTAATN

YAP1/MA0415.1/Jaspar

Match Rank:7
Score:0.93
Offset:-6
Orientation:forward strand
Alignment:------TTACGTAA------
ATTTGCTTACGTAAGCTCGT

CIN5(MacIsaac)/Yeast

Match Rank:8
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TTACGTAA-
TTACGTAAG

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TTACGTAA---
TTATGTAACAT

HLF/MA0043.2/Jaspar

Match Rank:10
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TTACGTAA--
NGTTACGTAANN