Information for 18-GCCTTARC (Motif 12)


Reverse Opposite:

p-value:1e-17
log p-value:-3.929e+01
Information Content per bp:1.682
Number of Target Sequences with motif476.0
Percentage of Target Sequences with motif10.66%
Number of Background Sequences with motif1425.7
Percentage of Background Sequences with motif7.16%
Average Position of motif in Targets462.1 +/- 393.7bp
Average Position of motif in Background302.9 +/- 210.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TRB2/MA1073.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCCTTARC
TGCCCTAA-

GZF3/Literature(Harbison)/Yeast

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCCTTARC
--CTTATC

GZF3(MacIsaac)/Yeast

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCCTTARC
--CTTATC

TBF1/MA0403.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCTTARC
AACCCTAA-

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCTTARC--
NCCTTATCTG

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCCTTARC-
--CTTATCT

GAT1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCCTTARC-
--CTTATCT

P0510F09.23/MA1030.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCTTARC-
AACCCTAGAT

GAT1/MA0300.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCCTTARC--
--CTTATCGG

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCTTARC--
NNCTTATCTN