Information for 16-YMYGTACA (Motif 11)


Reverse Opposite:

p-value:1e-19
log p-value:-4.543e+01
Information Content per bp:1.607
Number of Target Sequences with motif1952.0
Percentage of Target Sequences with motif43.73%
Number of Background Sequences with motif7372.5
Percentage of Background Sequences with motif37.00%
Average Position of motif in Targets435.9 +/- 364.4bp
Average Position of motif in Background305.5 +/- 214.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-YMYGTACA-
ACCCGTACAT

SFP1(MacIsaac)/Yeast

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-YMYGTACA-
ACCCGTACAT

FHL1(MacIsaac)/Yeast

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-YMYGTACA-
ATCCGTACAT

ara/MA0210.1/Jaspar

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:YMYGTACA
---TAACA

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--YMYGTACA-
CACCCGTACAT

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--YMYGTACA
CACCCGTACA

RAP1/MA0359.1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--YMYGTACA
CACCCATACA

mirr/MA0233.1/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:forward strand
Alignment:YMYGTACA
---AAACA

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----YMYGTACA------
TCGCGTCCGTACAGGAGGG

SPL14/MA0586.1/Jaspar

Match Rank:10
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----YMYGTACA------
TCGCGTCCGTACAGGAGGG