Information for 15-CGTAYRTA (Motif 9)


Reverse Opposite:

p-value:1e-21
log p-value:-5.038e+01
Information Content per bp:1.551
Number of Target Sequences with motif1198.0
Percentage of Target Sequences with motif36.04%
Number of Background Sequences with motif6078.0
Percentage of Background Sequences with motif28.26%
Average Position of motif in Targets375.9 +/- 309.1bp
Average Position of motif in Background263.6 +/- 202.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YAP6(MacIsaac)/Yeast

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CGTAYRTA-
-TTACATAA

TATA-box/SacCer-Promoters/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CGTAYRTA
BBHWTATATA

Cf2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGTAYRTA-
TATATATAC

MOT2/MA0379.1/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CGTAYRTA
---ATATA

Cf2/MA0015.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGTAYRTA---
-NTATATATAC

bin/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGTAYRTA
-ATAAATA

CIN5(MacIsaac)/Yeast

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGTAYRTA-
CTTACGTAA

NFIL3/MA0025.1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGTAYRTA-
ANGTTACATAA

nub/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGTAYRTA-
GCTTGCATAA

CIN5/CIN5_H2O2Lo/[](Harbison)/Yeast

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGTAYRTA-
-TTACGTAA