Information for 9-CACTGTGC (Motif 6)


Reverse Opposite:

p-value:1e-30
log p-value:-6.949e+01
Information Content per bp:1.794
Number of Target Sequences with motif493.0
Percentage of Target Sequences with motif14.83%
Number of Background Sequences with motif1871.0
Percentage of Background Sequences with motif8.70%
Average Position of motif in Targets385.7 +/- 309.9bp
Average Position of motif in Background259.1 +/- 209.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CACTGTGC
-GCTGTG-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CACTGTGC----
--CTGTTCCTGG

MET28/MA0332.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CACTGTGC
--CTGTGG

MET28(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CACTGTGC
--CTGTGG

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTGC---
NNGCNCTGCGCGGC

HMRA1/MA0327.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACTGTGC
-ATTGTGC

MATA1(MacIsaac)/Yeast

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACTGTGC
-ATTGTGC

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACTGTGC-
CGCGCTGAGCN

CDC5/MA0579.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACTGTGC-
CGCGCTGAGCN

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CACTGTGC-
WDNCTGGGCA