Information for 6-CACGTGAC (Motif 5)


Reverse Opposite:

p-value:1e-39
log p-value:-9.086e+01
Information Content per bp:1.883
Number of Target Sequences with motif206.0
Percentage of Target Sequences with motif6.20%
Number of Background Sequences with motif458.6
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets315.9 +/- 245.9bp
Average Position of motif in Background269.9 +/- 222.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TYE7(MacIsaac)/Yeast

Match Rank:1
Score:1.00
Offset:0
Orientation:reverse strand
Alignment:CACGTGAC
CACGTGAC

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.99
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGAC-
NCACGTGACN

CBF1(MacIsaac)/Yeast

Match Rank:3
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:CACGTGAC
CACGTGAC

TYE7/MA0409.1/Jaspar

Match Rank:4
Score:0.98
Offset:0
Orientation:forward strand
Alignment:CACGTGAC
CACGTGA-

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:5
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:CACGTGAC
CACGTGA-

Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer

Match Rank:6
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-CACGTGAC-
TCACGTGAYH

CBF1/MA0281.1/Jaspar

Match Rank:7
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-CACGTGAC
GCACGTGA-

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAC
ATCACGTGAC

TFEB/MA0692.1/Jaspar

Match Rank:9
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAC
ATCACGTGAC

SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer

Match Rank:10
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---CACGTGAC
WNBCACGTGA-