Information for 23-CGGGGTTC (Motif 15)


Reverse Opposite:

p-value:1e-12
log p-value:-2.897e+01
Information Content per bp:1.933
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif4.51%
Number of Background Sequences with motif509.0
Percentage of Background Sequences with motif2.37%
Average Position of motif in Targets342.0 +/- 310.3bp
Average Position of motif in Background265.9 +/- 222.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ROX1(MacIsaac)/Yeast

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CGGGGTTC-
GCGGGCTTNT

OPI1/MA0349.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CGGGGTTC-
--CGGTTCG

OPI1(MacIsaac)/Yeast

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CGGGGTTC-
--CGGTTCG

MIG1/MA0337.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGGGGTTC
GCGGGGN--

MIG3/MA0339.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGTTC
TGCGGGG---

MIG2/MA0338.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGTTC
NGCGGGG---

OAF1/MA0348.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGGGGTTC
TCGGAGATA

NHP10/MA0344.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGGGGTTC
GCCGGGGA--

YLR278C/MA0430.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGGGGTTC
CCGGAGTT-

lin-14/MA0261.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGGGGTTC
--GTGTTC