Information for 22-GCGGTCTA (Motif 14)


Reverse Opposite:

p-value:1e-16
log p-value:-3.693e+01
Information Content per bp:1.530
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif133.4
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets421.3 +/- 362.5bp
Average Position of motif in Background281.8 +/- 198.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Adf1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGGTCTA
CGCGGTCG-

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTCTA
TTGCGGTTT-

ZAP1/MA0589.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTCTA
GGCTCGGTCAA

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCGGTCTA
CTCGGTCAA

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTCTA
TTTGCGGTTT-

WRKY63/MA1092.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCGGTCTA-
-CGGTCAAC

WRKY25/MA1081.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCGGTCTA-
-CGGTCAAC

WRKY60/MA1090.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCGGTCTA---
CCGGTCAACGT

Run/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCGGTCTA
GGCGGTG--

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCGGTCTA--
CCGGTTTART