Information for 11-GGGTTCGA (Motif 9)


Reverse Opposite:

p-value:1e-32
log p-value:-7.568e+01
Information Content per bp:1.827
Number of Target Sequences with motif263.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif546.0
Percentage of Background Sequences with motif2.60%
Average Position of motif in Targets340.9 +/- 276.2bp
Average Position of motif in Background287.7 +/- 195.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:GGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

XBP1/MA0414.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGGTTCGA-
--NCTCGAG

YER051W(MacIsaac)/Yeast

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GGGTTCGA-
---TTCGAA

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

SNF1(MacIsaac)/Yeast

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTCGA-------
CCGGGTTCGATCCCCGG

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGTTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGTTCGA
TCGGNNCGA