Information for 10-CTCATCGC (Motif 8)


Reverse Opposite:

p-value:1e-34
log p-value:-7.968e+01
Information Content per bp:1.916
Number of Target Sequences with motif526.0
Percentage of Target Sequences with motif11.92%
Number of Background Sequences with motif1422.0
Percentage of Background Sequences with motif6.78%
Average Position of motif in Targets387.2 +/- 345.0bp
Average Position of motif in Background275.0 +/- 204.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--CTCATCGC
AKCTCATCGC

CHA4(MacIsaac)/Yeast

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC-
CTCATCGCA

TOD6/MA0350.1/Jaspar

Match Rank:3
Score:0.90
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCGC-----
AGGCACAGCTCATCGCGTTTT

DOT6/MA0351.1/Jaspar

Match Rank:4
Score:0.90
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCGC-----
TTCTGCACCTCATCGCATCCT

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CTCATCGC-
GGCTCAGCGCG

CDC5/MA0579.1/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CTCATCGC-
GGCTCAGCGCG

DAL80/MA0289.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC
CTTATCG-

srp/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTCATCGC
NTCTTATCGC

GZF3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC
CTTATC--

GZF3(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC
CTTATC--