Information for 7-CCGCGGAG (Motif 6)


Reverse Opposite:

p-value:1e-40
log p-value:-9.321e+01
Information Content per bp:1.732
Number of Target Sequences with motif860.0
Percentage of Target Sequences with motif19.50%
Number of Background Sequences with motif2594.6
Percentage of Background Sequences with motif12.38%
Average Position of motif in Targets458.1 +/- 357.9bp
Average Position of motif in Background281.7 +/- 211.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PDR1/MA0352.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

IME1/MA0320.1/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CCGCGGAG
CCGCCGAG

IME1(MacIsaac)/Yeast

Match Rank:3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CCGCGGAG
CCGCCGAG

PDR3/MA0353.1/Jaspar

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

PDR3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

PDR3(MacIsaac)/Yeast

Match Rank:6
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

SUT1/MA0399.1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCGCGGAG
-CGCGGGG

SUT1(MacIsaac)/Yeast

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCGCGGAG
-CGCGGGG

CMTA3/MA0970.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCGCGGAG-
CCGCGTTAC

CHA4/MA0283.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCGCGGAG-
-GGCGGAGA