Information for 2-CGCGCGGC (Motif 2)


Reverse Opposite:

p-value:1e-111
log p-value:-2.566e+02
Information Content per bp:1.596
Number of Target Sequences with motif1348.0
Percentage of Target Sequences with motif30.56%
Number of Background Sequences with motif3521.4
Percentage of Background Sequences with motif16.80%
Average Position of motif in Targets445.1 +/- 332.2bp
Average Position of motif in Background285.4 +/- 248.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGCGG-

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CGCGCGGC
CGCGCGCG

SUT1(MacIsaac)/Yeast

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGC
TAGCGCGC---

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGTGCC

MBP1/MA0329.1/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC
NNCGCGT---

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.73
Offset:-7
Orientation:reverse strand
Alignment:-------CGCGCGGC-
NCANGCGCGCGCGCCA

SUT1?/SacCer-Promoters/Homer

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGCGCGGC-
-GCGCGGGG

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC-----
NTCGCGCGCCTTNNN