Information for 16-CCCCTTTC (Motif 12)


Reverse Opposite:

p-value:1e-24
log p-value:-5.643e+01
Information Content per bp:1.902
Number of Target Sequences with motif384.0
Percentage of Target Sequences with motif8.71%
Number of Background Sequences with motif1044.9
Percentage of Background Sequences with motif4.99%
Average Position of motif in Targets421.6 +/- 319.9bp
Average Position of motif in Background281.7 +/- 213.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN4(MacIsaac)/Yeast

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTTC
CCCCCTT--

MSN4/Literature(Harbison)/Yeast

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTTC
NCCCCTG--

YER130C/MA0423.1/Jaspar

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTTC
ACCCCTATT

MSN2(MacIsaac)/Yeast

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTTC
GCCCCTT--

MSN4/MA0342.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CCCCTTTC
CCCCT---

RGM1/MA0366.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CCCCTTTC
CCCCT---

GIS1/MA0306.1/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTTC
ACCCCTAAA

MSN2/MA0341.1/Jaspar

Match Rank:8
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCCCTTTC
CCCCT---

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTTC
CCGCCCCTT--

RPH1/MA0372.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTTC
ACCCCTAA-