Information for 14-WTGCACGG (Motif 11)


Reverse Opposite:

p-value:1e-27
log p-value:-6.301e+01
Information Content per bp:1.631
Number of Target Sequences with motif1008.0
Percentage of Target Sequences with motif22.85%
Number of Background Sequences with motif3450.6
Percentage of Background Sequences with motif16.46%
Average Position of motif in Targets422.6 +/- 301.7bp
Average Position of motif in Background291.6 +/- 208.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:WTGCACGG--
TBGCACGCAA

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:WTGCACGG-
---CACGCA

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:WTGCACGG--
--GCACGTNC

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:WTGCACGG---
-GGCACGCGTC

SPL5/MA1059.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:WTGCACGG-
TTGTACGGC

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:WTGCACGG--
--GCACGTAY

SPL12/MA1057.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:WTGCACGG-
-TGTACGGT

SPL4/MA1058.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:WTGCACGG--
-CGTACGGTT

h/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-WTGCACGG-----
NNGGCACGCGCCAN

RCS1(MacIsaac)/Yeast

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:WTGCACGG
-TGCACCC