Information for 12-GTATGGGT (Motif 10)


Reverse Opposite:

p-value:1e-31
log p-value:-7.189e+01
Information Content per bp:1.888
Number of Target Sequences with motif490.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1336.8
Percentage of Background Sequences with motif6.38%
Average Position of motif in Targets408.9 +/- 324.9bp
Average Position of motif in Background282.2 +/- 195.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP1/MA0359.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GTATGGGT-
TGTATGGGTG

RAP1(MacIsaac)/Yeast

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--GTATGGGT--
GTGTATGGGTGT

SFP1(MacIsaac)/Yeast

Match Rank:3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GTATGGGT
ATGTACGGGT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GTATGGGT
ATGTACGGGT

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:5
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GTATGGGT-
TGTACGGGTG

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GTATGGGT-
ATGTACGGGTG

FHL1(MacIsaac)/Yeast

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GTATGGGT
ATGTACGGAT

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTATGGGT
GGTACGG--

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GTATGGGT---
NNTNNTGTCTGGNNTNG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTATGGGT
CTGTCTGG--