Information for 9-CCGYGGAG (Motif 6)


Reverse Opposite:

p-value:1e-36
log p-value:-8.343e+01
Information Content per bp:1.816
Number of Target Sequences with motif678.0
Percentage of Target Sequences with motif19.74%
Number of Background Sequences with motif2497.6
Percentage of Background Sequences with motif12.14%
Average Position of motif in Targets477.8 +/- 372.9bp
Average Position of motif in Background279.6 +/- 244.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PDR1/MA0352.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCGYGGAG
TCCGCGGA-

PDR3/MA0353.1/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CCGYGGAG
TCCGCGGA-

PDR3/Literature(Harbison)/Yeast

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CCGYGGAG
TCCGCGGA-

PDR3(MacIsaac)/Yeast

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CCGYGGAG
TCCGCGGA-

IME1/MA0320.1/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CCGYGGAG
CCGCCGAG

IME1(MacIsaac)/Yeast

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CCGYGGAG
CCGCCGAG

NHP10/MA0344.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CCGYGGAG
GCCGGGGA-

SUT1/MA0399.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCGYGGAG
CCCCGCG---

SUT1(MacIsaac)/Yeast

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCGYGGAG
CCCCGCG---

CMTA2/MA0969.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGYGGAG
AAACCGCGT--