Information for 6-CACGTGMC (Motif 4)


Reverse Opposite:

p-value:1e-39
log p-value:-9.159e+01
Information Content per bp:1.681
Number of Target Sequences with motif682.0
Percentage of Target Sequences with motif19.85%
Number of Background Sequences with motif2450.8
Percentage of Background Sequences with motif11.91%
Average Position of motif in Targets381.1 +/- 287.1bp
Average Position of motif in Background276.0 +/- 220.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CBF1(MacIsaac)/Yeast

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:CACGTGMC
CACGTGAC

IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CACGTGMC
CACGTGCC

BHLHE40/MA0464.2/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMC
ATCACGTGAC

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMC
ATCACGTGAC

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMC
ATCACGTGAC

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGMC-
NCACGTGACN

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CACGTGMC-
KCACGTGMCN

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--CACGTGMC
GACACGTGCC

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGMC-
TCACGTGACC

TYE7(MacIsaac)/Yeast

Match Rank:10
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:CACGTGMC
CACGTGAC