Information for 14-CTCATCGC (Motif 10)


Reverse Opposite:

p-value:1e-27
log p-value:-6.345e+01
Information Content per bp:1.900
Number of Target Sequences with motif452.0
Percentage of Target Sequences with motif13.16%
Number of Background Sequences with motif1584.4
Percentage of Background Sequences with motif7.70%
Average Position of motif in Targets435.1 +/- 429.6bp
Average Position of motif in Background273.6 +/- 215.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--CTCATCGC
AKCTCATCGC

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.90
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCGC-----
AGGCACAGCTCATCGCGTTTT

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.89
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCGC-----
TTCTGCACCTCATCGCATCCT

CHA4(MacIsaac)/Yeast

Match Rank:4
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC-
CTCATCGCA

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTCATCGC-
GGCTCAGCGCG

CDC5/MA0579.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTCATCGC-
GGCTCAGCGCG

GZF3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC
CTTATC--

GZF3(MacIsaac)/Yeast

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC
CTTATC--

DAL80/MA0289.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTCATCGC
CTTATCG-

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTCATCGC
TCTTATC--