Information for 10-ATGCACGG (Motif 9)


Reverse Opposite:

p-value:1e-30
log p-value:-7.115e+01
Information Content per bp:1.914
Number of Target Sequences with motif255.0
Percentage of Target Sequences with motif6.57%
Number of Background Sequences with motif589.0
Percentage of Background Sequences with motif2.92%
Average Position of motif in Targets422.2 +/- 351.3bp
Average Position of motif in Background307.6 +/- 233.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ATGCACGG--
ATGTACGGAT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATGCACGG---
ATGTACGGGTG

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATGCACGG--
ATGTACGGGT

SFP1(MacIsaac)/Yeast

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATGCACGG--
ATGTACGGGT

PHD1/MA0355.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATGCACGG
NGNTGCAGGN

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATGCACGG---
-TGTACGGGTG

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATGCACGG--
--GCACGTNC

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATGCACGG------
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATGCACGG------
CCCTNCTGTACGGACGNNA

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATGCACGG--
--GCACGTAY