Information for 15-YATCGCAT (Motif 13)


Reverse Opposite:

p-value:1e-21
log p-value:-5.035e+01
Information Content per bp:1.877
Number of Target Sequences with motif589.0
Percentage of Target Sequences with motif15.18%
Number of Background Sequences with motif2048.3
Percentage of Background Sequences with motif10.16%
Average Position of motif in Targets393.7 +/- 331.0bp
Average Position of motif in Background283.2 +/- 198.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHA4(MacIsaac)/Yeast

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--YATCGCAT
CTCATCGCA-

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----YATCGCAT----
NNNTCCATCCCATAANN

Optix/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--YATCGCAT
NNTATCACTT

Su(H)/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YATCGCAT
-CTCCCAC

DOT6/MA0351.1/Jaspar

Match Rank:5
Score:0.68
Offset:-10
Orientation:forward strand
Alignment:----------YATCGCAT---
TTCTGCACCTCATCGCATCCT

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--YATCGCAT--
GGGATTGCATNN

BEAF-32B/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--YATCGCAT
AATATCGC--

TOD6?/SacCer-Promoters/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:YATCGCAT---
-AKCTCATCGC

GLN3/MA0307.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-YATCGCAT
TTATC----

byn/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-YATCGCAT
AATTCGCAC