Information for 12-MCACACAC (Motif 11)


Reverse Opposite:

p-value:1e-25
log p-value:-5.835e+01
Information Content per bp:1.598
Number of Target Sequences with motif557.0
Percentage of Target Sequences with motif14.36%
Number of Background Sequences with motif1841.0
Percentage of Background Sequences with motif9.13%
Average Position of motif in Targets433.5 +/- 313.6bp
Average Position of motif in Background270.4 +/- 280.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-MCACACAC-
CACACACACA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--MCACACAC--
GGCCACACCCAN

MET31(MacIsaac)/Yeast

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-MCACACAC
GCCACACC-

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--MCACACAC-
GGCCACACCCA

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----MCACACAC----
AGCGGCACACACGCAA

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-MCACACAC---
YCCGCCCACGCN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-MCACACAC-
GCCACACCCA

AFT2/MA0270.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:MCACACAC-
-CACACCCC

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:9
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-MCACACAC-
GCCCCACCTC

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--MCACACAC--
GGACACACCCCC