Information for 12-CGCGTTTC (Motif 9)


Reverse Opposite:

p-value:1e-28
log p-value:-6.605e+01
Information Content per bp:1.814
Number of Target Sequences with motif682.0
Percentage of Target Sequences with motif15.27%
Number of Background Sequences with motif2012.5
Percentage of Background Sequences with motif9.90%
Average Position of motif in Targets461.4 +/- 340.6bp
Average Position of motif in Background299.6 +/- 217.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CGCGTTTC
ACGCGTT--

STE12/MA0393.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CGCGTTTC-
--TGTTTCA

che-1/MA0260.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGCGTTTC
--GGTTTC

MA0260.1_che-1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGCGTTTC
--GGTTTC

PL0018.1_hlh-25/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGCGTTTC----
AAGGCGCGTGTCCCAG

PL0004.1_hlh-27/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CGCGTTTC----
ATGCGCGTGTCCCAG

MBP1/MA0329.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTTTC
NNCGCGT---

CMTA3/MA0970.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGCGTTTC
CCGCGTTAC

STE12(MacIsaac)/Yeast

Match Rank:9
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGCGTTTC-
--TGTTTCA

CMTA2/MA0969.1/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGCGTTTC
AAACCGCGT---