Information for 8-ACACACAC (Motif 5)


Reverse Opposite:

p-value:1e-41
log p-value:-9.497e+01
Information Content per bp:1.709
Number of Target Sequences with motif1238.0
Percentage of Target Sequences with motif27.71%
Number of Background Sequences with motif3928.7
Percentage of Background Sequences with motif19.34%
Average Position of motif in Targets443.3 +/- 336.8bp
Average Position of motif in Background272.6 +/- 229.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-ACACACAC-
CACACACACA

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----ACACACAC----
AGCGGCACACACGCAA

daf-12/MA0538.1/Jaspar

Match Rank:3
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---ACACACAC----
NACGCACACACACAC

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ACACACAC--
GGACACACCCCC

AFT2/MA0270.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ACACACAC-
-CACACCCC

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACACACAC-
GGCCACACCCA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ACACACAC--
GGCCACACCCAN

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACACACAC
GCAAACAM

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACACACAC-
GCCACACCCA

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACACACAC
-CACGCA-