Information for 5-GGAAAAAA (Motif 3)


Reverse Opposite:

p-value:1e-59
log p-value:-1.373e+02
Information Content per bp:1.944
Number of Target Sequences with motif2234.0
Percentage of Target Sequences with motif50.01%
Number of Background Sequences with motif7711.9
Percentage of Background Sequences with motif37.95%
Average Position of motif in Targets404.2 +/- 346.2bp
Average Position of motif in Background293.3 +/- 206.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----GGAAAAAA--
TACTGGAAAAAAAA

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:GGAAAAAA
--AAAAAA

kni/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GGAAAAAA
GGGAACAAA

RGT1(MacIsaac)/Yeast

Match Rank:4
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---GGAAAAAA
GCCGGAAAAA-

hb/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGAAAAAA
ATAAAAAA

EDS1/MA0294.1/Jaspar

Match Rank:6
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGAAAAAA
CGGAAAAAT

hb/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGAAAAAA
CATAAAAAA

hb/dmmpmm(Down)/fly

Match Rank:8
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAAAA
CATAAAAAA

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAAAA
TGGAAAA--

hb/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGAAAAAA
CAAAAAAA