Information for 2-DNCGCGCG (Motif 2)


Reverse Opposite:

p-value:1e-84
log p-value:-1.942e+02
Information Content per bp:1.634
Number of Target Sequences with motif922.0
Percentage of Target Sequences with motif20.64%
Number of Background Sequences with motif2160.6
Percentage of Background Sequences with motif10.63%
Average Position of motif in Targets447.4 +/- 336.5bp
Average Position of motif in Background292.7 +/- 253.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:DNCGCGCG
-NNGCGCG

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:DNCGCGCG--
--CGCGCGCG

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:DNCGCGCG---
---GCGCGCTA

Tcfl5/MA0632.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:DNCGCGCG--
GGCACGTGCC

MBP1/MA0329.1/Jaspar

Match Rank:5
Score:0.81
Offset:3
Orientation:forward strand
Alignment:DNCGCGCG--
---ACGCGTA

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-DNCGCGCG-------
TGGCGCGCGCGCCTGA

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---DNCGCGCG----
ATAAAGGCGCGCGAT

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:DNCGCGCG----
NAVGCGCGTGDD

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:DNCGCGCG-------
ANCGCGCGCCCTTNN

SUT1(MacIsaac)/Yeast

Match Rank:10
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:DNCGCGCG
-CCCCGCG